The Development of Segmentation Algorithms in Holographic Microscopy and Tomography for Determination of Morphological Parameters of Cells
- Авторы: Belashov A.V.1, Gorbenko D.A.1,2, Zhikhoreva A.A.1, Belyaeva T.N.3, Kornilova E.S.3, Semenova I.V.1, Vasyutinskii O.S.1
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Учреждения:
- Ioffe Institute, Russian Academy of Sciences
- ITMO University
- Institute of Cytology, Russian Academy of Sciences
- Выпуск: Том 45, № 11 (2019)
- Страницы: 1140-1143
- Раздел: Article
- URL: https://bakhtiniada.ru/1063-7850/article/view/208485
- DOI: https://doi.org/10.1134/S1063785019110191
- ID: 208485
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Аннотация
Algorithms of cell segmentation on two-dimensional phase images and three-dimensional distributions of a refractive index obtained by means of digital holographic microscopy and tomography are developed. The proposed algorithms are optimized for determining cell morphology characteristics including the cell volume, projection area, and surface area. A comparative analysis of the error of cell volume determination by holographic methods using the proposed cell segmentation algorithms and the standard method of confocal fluorescence microscopy has been performed.
Об авторах
A. Belashov
Ioffe Institute, Russian Academy of Sciences
Автор, ответственный за переписку.
Email: belashov.andrey.93@gmail.com
Россия, St. Petersburg, 194021
D. Gorbenko
Ioffe Institute, Russian Academy of Sciences; ITMO University
Email: belashov.andrey.93@gmail.com
Россия, St. Petersburg, 194021; St. Petersburg, 197101
A. Zhikhoreva
Ioffe Institute, Russian Academy of Sciences
Email: belashov.andrey.93@gmail.com
Россия, St. Petersburg, 194021
T. Belyaeva
Institute of Cytology, Russian Academy of Sciences
Email: belashov.andrey.93@gmail.com
Россия, St. Petersburg, 194064
E. Kornilova
Institute of Cytology, Russian Academy of Sciences
Email: belashov.andrey.93@gmail.com
Россия, St. Petersburg, 194064
I. Semenova
Ioffe Institute, Russian Academy of Sciences
Email: belashov.andrey.93@gmail.com
Россия, St. Petersburg, 194021
O. Vasyutinskii
Ioffe Institute, Russian Academy of Sciences
Email: belashov.andrey.93@gmail.com
Россия, St. Petersburg, 194021
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