The Development of Segmentation Algorithms in Holographic Microscopy and Tomography for Determination of Morphological Parameters of Cells
- Авторлар: Belashov A.V.1, Gorbenko D.A.1,2, Zhikhoreva A.A.1, Belyaeva T.N.3, Kornilova E.S.3, Semenova I.V.1, Vasyutinskii O.S.1
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Мекемелер:
- Ioffe Institute, Russian Academy of Sciences
- ITMO University
- Institute of Cytology, Russian Academy of Sciences
- Шығарылым: Том 45, № 11 (2019)
- Беттер: 1140-1143
- Бөлім: Article
- URL: https://bakhtiniada.ru/1063-7850/article/view/208485
- DOI: https://doi.org/10.1134/S1063785019110191
- ID: 208485
Дәйексөз келтіру
Аннотация
Algorithms of cell segmentation on two-dimensional phase images and three-dimensional distributions of a refractive index obtained by means of digital holographic microscopy and tomography are developed. The proposed algorithms are optimized for determining cell morphology characteristics including the cell volume, projection area, and surface area. A comparative analysis of the error of cell volume determination by holographic methods using the proposed cell segmentation algorithms and the standard method of confocal fluorescence microscopy has been performed.
Авторлар туралы
A. Belashov
Ioffe Institute, Russian Academy of Sciences
Хат алмасуға жауапты Автор.
Email: belashov.andrey.93@gmail.com
Ресей, St. Petersburg, 194021
D. Gorbenko
Ioffe Institute, Russian Academy of Sciences; ITMO University
Email: belashov.andrey.93@gmail.com
Ресей, St. Petersburg, 194021; St. Petersburg, 197101
A. Zhikhoreva
Ioffe Institute, Russian Academy of Sciences
Email: belashov.andrey.93@gmail.com
Ресей, St. Petersburg, 194021
T. Belyaeva
Institute of Cytology, Russian Academy of Sciences
Email: belashov.andrey.93@gmail.com
Ресей, St. Petersburg, 194064
E. Kornilova
Institute of Cytology, Russian Academy of Sciences
Email: belashov.andrey.93@gmail.com
Ресей, St. Petersburg, 194064
I. Semenova
Ioffe Institute, Russian Academy of Sciences
Email: belashov.andrey.93@gmail.com
Ресей, St. Petersburg, 194021
O. Vasyutinskii
Ioffe Institute, Russian Academy of Sciences
Email: belashov.andrey.93@gmail.com
Ресей, St. Petersburg, 194021
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