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Vol 6, No 2 (2016)

Article

Genetics of multiple sclerosis today

Sokolova E.A., Boyarskikh U.A., Aulchenko Y.S., Filipenko M.L.

Abstract

Multiple sclerosis is a common multifactorial disease in which the etiology of the interaction between external factors and structural specificities of a large number of genes plays an important role. Identification of the risk factors for multiple sclerosis and the development of an integrated pathogenesis model is a challenging task for neurology. The goal of the current review is to describe current approaches to studying the genetics of multifactorial diseases on the whole and multiple sclerosis in particular. Basic approaches to the design of the genetic epidemiological studies are described. Towards this end we discuss the gene candidate and the whole-genome methods of studying genetic associations, the statistical approaches used to combine the diverse data, namely, meta-analysis of the results of different studies, analysis of the association with groups of functionally related genes, and comparison of the genetic bases of the diseases with similar pathogenesis.

Biology Bulletin Reviews. 2016;6(2):113-125
pages 113-125 views

The role of cytokines in memory consolidation

Malashenkova I.K., Krynskiy S.A., Khailov N.A., Kazanova G.V., Velichkovsky B.B., Didkovsky N.A.

Abstract

This review discusses the molecular mechanisms underlying memory consolidation, in particular, the neuroimmune interactions that take place during memory consolidation. Animal models of hippocampus-dependent learning show that cytokines secreted by immune cells are necessary for the neural functions that underlie cognition, such as the long-term potentiation of synaptic plasticity and neurogenesis in the subgranular zone of the hippocampus. The basic principles of neuroimmune interactions in acute and chronic stress are discussed, as well as the causes of neuroimmune dysregulation that may compromise cognitive functions and promote the development of neurodegenerative pathology.

Biology Bulletin Reviews. 2016;6(2):126-140
pages 126-140 views

GDF11 protein as a geroprotector

Khavinson V.K., Kuznik B.I., Tarnovskaya S.I., Linkova N.S.

Abstract

GDF11 protein, the growth differentiation factor 11, which belongs to the TGF-β superfamily (transforming growth factor β), shows marked geroprotective effects on the cardiovascular and nervous systems. The cardioprotective and myoprotective effects of the GDF11 protein are associated with its regulation of several signaling molecules, including the MAPK–p38–mioglianin pathway. GDF11 neuroprotective action is associated with the regulation of proliferation and differentiation of brain neurons by means of changing the activity of the p57 (Kip2) and p27 (Kip1) transcription factors. GDF11 may be considered a potential target for geroprotector drugs, as was demonstrated in the case of the Glu-Asp-Arg peptide possessing similar neuroprotective and myoprotective properties as GDF11. For the Glu-Asp-Arg, Ala-Glu-AspGly, and Lys-Glu peptides, binding sites were found in the promoter region of GDF11: the CCTGC, ATTTC, and GCAG motifs, respectively.

Biology Bulletin Reviews. 2016;6(2):141-148
pages 141-148 views

Polymorphism of lignification enzymes in plants: Functional importance and applied aspects

Konovalov A.A., Shundrina I.K., Karpova E.V.

Abstract

The synthesis of lignin and its deposition in secondary cell walls leads to the formation of sclerenchyma, a tissue having mechanical strength. This biochemical mechanism arose about 400–420 million years ago, in the Early Silurian period, in the first vascular plants (Tracheophyta order). The appearance of sclerenchyma is related to the emergence of plants on land and formation of the terrestrial flora. Lignified tissues of plants also perform conducting and protective functions, in addition to its mechanical (supporting) one. The polymorphic options of the enzymes involved into biosynthesis of lignin and its accompanying substances (PAL (phenylalanine ammonia-lyase), C4H (cinnamate 4-hydroxylase), C3H (p-coumarate 3-hydroxylase), F5H (ferulate 5-hydroxylase), COMT (caffeic acid O-methyltransferase), CCoAOMT (caffeoyl-CoA Omethyltransferase), 4CL (4-coumarate:CoA ligase), CCR (cinnamoyl-CoA reductase), CAD (cinnamyl alcohol dehydrogenase), and SAD (sinapyl alcohol dehydrogenase) were considered with the use of a number of plants: corn, millet, sorghum, rice, wheat, fescue, elephant grass, brachypodium (purple false brome), tobacco, alfalfa, arabidopsis, poplar, eucalyptus, pine, spruce, and ginkgo. Mutant variants of enzymes can be found in natural or breeding populations; they may be also obtained with the use of mutagens. In recent decades, T-DNA-mutagenesis is widely used. Mutations can cause changes in the expression of the corresponding genes and (or) disturb the structure of protein molecules. As a result, numerous changes in the phenotype can occur. Among them are changes in the structure and chemical composition of tissues, as well as in growth processes and plant development. The appearance of colored (brown midrib, reddish brown, pink, red-brown, red-wine, etc.) forms of plants was described in many species. Some publications noted an interrelation between the biosynthesis of monolignols and that of flavonoid pigments. Mutant forms are widely used at present to produce forage cultivars and bioethanol, to improve pulp properties (production of paper and viscose fiber), and to sequester atmospheric carbon. The synthesis of mutants from this group of enzymes and their use are considered promising trends of modern plant biotechnology.

Biology Bulletin Reviews. 2016;6(2):149-163
pages 149-163 views

Revisiting the problem of astatic ecological optima

Kuznetsov V.A., Zdanovich V.V., Lobachov E.A., Lukiyanov S.V.

Abstract

The development of the concept of an ecological optimum is discussed, and experimental data enabling its revision are analyzed. The published data on the effect of fluctuating ecological factors on various parameters of the vital activity of poikilothermic aquatic organisms and some other organisms are given. The need for terms of stationary (or static) and dynamic (or astatic) optima in modern ecology is discussed. Possible mechanisms of optimization of the vital activity of organisms under conditions of varying factors of the environment are considered.

Biology Bulletin Reviews. 2016;6(2):164-176
pages 164-176 views

Variability of genome size in conifers under extreme environmental conditions

Sedel’nikova T.S.

Abstract

Transformation of the genome size in conifers growing in an extreme environment is manifested in the variability of the number of chromosomes, content of nuclear DNA, modulation of simple repetitive DNA sequences, specificity of the localization and activity of ribosomal DNA genes, activity of retrotransposons, induction of mutation processes, and polymorphism of chromosome rearrangements.

Biology Bulletin Reviews. 2016;6(2):177-188
pages 177-188 views

Bacterial intracellular pathogens: Offense and defense strategies

Rozov S.M., Deineko E.V.

Abstract

The invasion of unicellular organisms into other organisms’ cells is widespread among bacteria, protozoa, and fungi. This phenomenon is most often manifested as intracellular parasitism, resulting in serious diseases in humans, animals, and plants. Intracellular pathogen species include about 20 bacterial taxa that can cause serious diseases in humans and animals, such as tuberculosis, leprosy, typhus, salmonellosis, brucellosis, trachoma, dysentery, and other. This review considers in detail the survival strategies of various intracellular bacterial pathogens: their mechanisms of interaction with the host cell membrane, techniques of intrusion into the host cell, survival strategies within the host cell, and mechanisms to avoid host immune responses. We also discuss the strategies of latent persistence of certain bacterial intracellular pathogens, which permit them to survive in the host organism in an inactive form for a long time under conditions of high immune pressure and become rapidly reactivated when the host immune-response levels are reduced.

Biology Bulletin Reviews. 2016;6(2):189-201
pages 189-201 views