Vol 86, No 2 (2017)

The system of the green microalgal order Protosiphonales (Chlorophyceae, Chlorophyta) constructed based on morphological, ecological, and molecular genetic data is considered. Subdivision of the order (=macroclade Stephanosphaerinia) into four groups is proposed, with three probably corresponding to the families Stephanosphaeraceae, Chlorococcaceae, and Protosiphonaceae and the fourth having an indefinite status. The diagnostic characteristics of the families, genera, and species are discussed, as well as the independent rank of some taxa. Morphological descriptions of a number of species are supplemented. Based on polyphasic approach, strain ACSSI 23 is proposed as a candidate for a new genus and species.

Secondary metabolites of 22 fungal strains (genus Aspergillus, section Usti) isolated at diverse geographic regions, including the Arctic permafrost deposits, were studied. The studied strains were found to synthesize a variety of biologically active compounds, structurally identified as drimane sesqueterpenoids, isoquinoline alkaloids (TMC-120 A−C, derivative 1), meroterpenoids (austalides О and J), and anthraquinone pigments (averufin, versicolorin C). Desferritriacetylfusigen production by A. calidoustus isolates is reported for the first time. The individual spectra of secondary metabolites were used for reidentification of 17 strains, of which 15 were identified as A. calidoustus and two, as A. pseudodeflectus.

The marine Bacillus sp. strain 1839 produces tetrodotoxin-like (TTX-like) compounds during sporulation. In this study, the environmental signals that regulate spore formation and the synthesis of TTX-like substances were examined. The main sporulation trigger for Bacillus sp. 1839 was changes in environmental osmolality. Confocal laser scanning (CLSM) and transmission electron microscopy with anti-TTX anti-bodies were used to locate TTX-like compounds in a sporulated culture of Bacillus sp. 1839. Based on CLSM studies, the toxin was synthesized within a few minutes after the induction of sporulation, and the fluorescence signal reached the maximum intensity in 60 min. Immunoelectron microscopy enabled the detection of TTX-positive structures in spores with unformed cores. The results obtained in this study provide an important basis for the development of biotechnological production methods for the highly effective anesthetic drug.

Ability of actinobacteria Rhodococcus opacus 1CP to survive under unfavorable conditions and retain its biodegradation activity was assessed. The morphological and ultrastructural features of R. opacus 1CP cells degrading benzoate in the presence of oxidants and stress-protecting agents were investigated. The cells of R. opacus 1CP were resistant to oxidative stress caused by up to 100 mM H₂O₂ or up to 25 μM juglone (5-oxy-1,4-naphthoquinone). After 2 h of stress impact, changes in the fatty acid composition, increased activity of antioxidant enzymes, and changes in cell morphology and ultrastructure were observed. The strain retained its ability to degrade benzoate. Quercetin had a protective effect on benzoate-degrading cells of R. opacus 1CP. The strategy for cells survival under unfavorable conditions was formulated, which included decreased cell size/volume and formation of densely-packed cell conglomerates, in which the cells are embedded into a common matrix. Formation of conglomerates may probably be considered as a means for protecting the cells against aggressive environmental factors. The multicellular conglomerate structure and the matrix material impede the penetration of toxic substances into the conglomerates, promoting survival of the cells located inside.

Immobilization of photobacteria in the cryogel of polyvinyl alcohol (PVA) was carried out. Immobilization was found to result in increased intensity and stability of bioluminescence. The elements determining the stability of bioluminescence were investigated. Selection of the strain was found to be of the highest importance. Among immobilized cells, Photobacterium phosphoreum exhibited the most intense and prolonged light emission, while Vibrio harveyi showed the least one. The technological procedures for cryogenic immobilization of photobacteria were determined. The role of the environment of gel formation in the preservation of the bioluminescence activity was determined. In the gels formed in rich medium for submerged cultivation of photobacteria, almost 100% luminescence activity was preserved, while light emission was considerably prolonged. Bioluminescence intensity of the preparations was shown to depend significantly on pH of the incubation medium. The pH shift to acidic values during prolonged incubation of immobilized cells was shown to be one of the factors of bioluminescence quenching. The stress effects of cryogenic immobilization were found to have an insignificant effect on the temperature profile of bioluminescence. Decreased reduction rate of the luciferase flavin substrate was shown to be a possible reason for bioluminescence quenching.

The preservation of activity of extracellular enzymes in soil is presently associated with their immobilization on organic or inorganic carriers. Enzyme immobilization results, however, in a significant decrease in enzymatic activity. In the present work, the mechanism responsible for promotion of the catalytic activity was revealed, as well as the favorable effect of low-molecular alkylhydrozybenzenes of the class of alkylresorcinols, which are common in soil organic matter, on stability of immobilized enzymes (exemplified by amylases) by their post-translational modification. Optimal conditions (enzyme to sorbent ratio, pH optimum, CaCl₂ concentration, and sorption time) for amylase sorption on a biological sorbent (yeast cell walls) were determined and decreased activity of the immobilized enzyme compared to its dissolved state was confirmed. Alkylresorcinols (C₇AHB) at concentrations of 1.6 to 80 mM were found to cause an increase of amylase activity both in the case of already sorbed enzymes (by 30%) and in the case of a free dissolved enzyme with its subsequent immobilization (by 50–60%). In both cases, the optimal C₇AHB concentration was 16 mM. Amylase stability was determined for C7AHB-modified and unmodified enzymes immobilized on the biological sorbent after two cycles of freezing (–20°C) and thawing (4°C). Inverse dependence was revealed between increasing stability of C₇AHB-modified enzymes and an increase in their activity, as well as higher stability of immobilized modified amylases than of the dissolved modified enzyme. Investigation of the effect of C₇HOB-modification in the preservation of activity in immobilized amylases after four freeze–thaw cycles revealed: (1) better preservation of activity by the modified immobilized enzymes compared to immobilized ones; (2) differences in the dynamics of activity loss within compared pairs, with activity of immobilized amylases decreasing after the second cycle to a lower level (42%) than activity of the modified immobilized enzymes after the fourth cycle (48%). These results demonstrate that in the preservation of activity of extracellular enzymes in soil both stabilization mechanisms are of importance: immobilization on organic carriers and modification of the enzyme conformation by low-molecular compounds with the functions of chemical chaperones.

Yeast abundance and species diversity of endophytic complexes in galls (cecidia) formed on the leaves of Salix fragilis, Salix caprea, Quercus robur, Tilia cordata, and Ulmus laevis and the epiphytic yeast communities of undamaged leaves of these plants were studied. Dynamics of yeast abundance in the galls was significantly different from that of the epiphytic yeast communities. Maximum numbers of endophytic yeast cells in the galls (up to 10⁴ CFU/g) were comparable to abundance of epiphytic yeasts. A total of 14 species of endophytic yeasts were isolated from galls of different plants. Ascomycetous yeasts were found to predominate in the insect galls on willows and oak, while basidiomycetous yeasts dominated in mite galls on linden and elm, as well as on plant leaves. These results indicate that gall formation may be considered not only as a bidirectional pathological process of the interaction between plants and invertebrates, but also as a process in which the endophytic microbial population of the galls plays an important role.

Soil and water contaminated with arsenic (As) through natural or anthropogenic inputs are commonly considered as native source of tolerant bacterial strains. The present study was successful in characterizing 12 hyper-tolerant bacteria, satisfying maximum tolerable concentration (MTC) for arsenate (As⁵⁺) ≥ 300 mM and arsenite (As³⁺) ≥ 30 mM, isolated from As affected North 24 Parganas and South 24 Parganas districts of West Bengal, India. Most of the bacteria showing higher level of tolerance to As⁵⁺ and As³⁺ were found as gram-positive and bacilli in shape. Positive responses to different biochemical tests indicated that some of these bacteria could be potent sources of various biotechnologically important enzymes. Some of the hyper-tolerant bacteria could reduce As⁵⁺ to As³⁺ while all others could oxidise As³⁺ to As⁵⁺. Phylogenetic analysis revealed that those hyper-tolerant bacterial strains were distributed among three phyla such as Actinobacteria, Firmicutes, and γ-Proteobacteria. The Firmicutes were well represented in this study with more than half of the hyper-tolerant strains corresponding to members of this group. Moreover, majority of the isolates except SR10 belonging to this phylum were affiliated to different species of the genus Bacillus and showed different tolerance capability to As³⁺ and As⁵⁺. We present the first report of the genus Paenibacillus as being involved in arsenite oxidation with hyper-tolerance property to As. Four isolates named as SDe5, SDe12, SDe13, and SDe15 belonging to genera Bacillus and Rhodococcus exhibited highest tolerance to As and therefore represented as good candidates for bioremediation processes of native polluted soil and ground water.