Deep sequencing analysis of bacterial community structure of Soldhar hot spring, India
- Authors: Sharma A.1, Paul D.1, Dhotre D.1, Jani K.1, Pandey A.2, Shouche Y.S.1
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Affiliations:
- Microbial Culture Collection
- Biotechnological Applications
- Issue: Vol 86, No 1 (2017)
- Pages: 136-142
- Section: Experimental Articles
- URL: https://bakhtiniada.ru/0026-2617/article/view/162982
- DOI: https://doi.org/10.1134/S0026261717010118
- ID: 162982
Cite item
Abstract
We investigated the bacterial community structure of Soldhar hot spring with extreme high temperature 95°C located in Uttarakhand, India using high throughput sequencing. Bacterial phyla Proteobacteria (88.8%), Deinococcus-Thermus (7.5%), Actinobacteria (2.3%), and Firmicutes (1.07%) were predominated in the sequencing survey, whereas Bacteroidetes, Verrucomicrobia, Aquificae and Acidobacteria were detected in relatively lower abundance in Soldhar hot spring. At the family level, Comamonadaceae (52.5%), Alteromonadaceae (15.9%), and Thermaceae (7.5%) were mostly dominated in the ecosystem followed by Chromatiaceae, Microbacteriaceae, and Cyclobacteriaceae. Besides, members of Rhodobacteraceae, Moraxellaceae, Xanthomonadaceae, Aquificaceae, Enterobacteriaceae, Bacillaceae, Methylophilaceae, etc. were detected as a relatively lower abundance. In the present study we discuss the overall microbial community structure and their relevance to the ecology of the Soldhar hot spring environment.
Keywords
About the authors
A. Sharma
Microbial Culture Collection
Author for correspondence.
Email: avinash.nccs@gmail.com
India, Pune, Maharashtra, 411007
D. Paul
Microbial Culture Collection
Email: avinash.nccs@gmail.com
India, Pune, Maharashtra, 411007
D. Dhotre
Microbial Culture Collection
Email: avinash.nccs@gmail.com
India, Pune, Maharashtra, 411007
K. Jani
Microbial Culture Collection
Email: avinash.nccs@gmail.com
India, Pune, Maharashtra, 411007
A. Pandey
Biotechnological Applications
Email: avinash.nccs@gmail.com
India, Kosi-Katarmal, Uttakrakhand, Almora, 263643
Y. S. Shouche
Microbial Culture Collection
Email: avinash.nccs@gmail.com
India, Pune, Maharashtra, 411007
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